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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920146.1_cds_XP_016469330.1_61882
CDS Infomation

[gene=LOC107791726] [db_xref=GeneID:107791726] [protein=protein TIC 40, chloroplastic] [protein_id=XP_016469330.1] [location=complement(join(4066..4125,4348..4395,4530..4633,5789..5883,6645..6690,7477..7517,9456..9534,10235..10334,10414..10508,11817..12102,13039..13056,13158..13215,13379..13490,16367..16571))] [gbkey=CDS]
Sequence

ATGGAGAACATAGGAATAGTTTCATCACCGAAAATGGTATTGGGTCTCTCTTCAAATCCA
AGGAATTCAGTAATTACCAGCAAACCCTTCTTTGGTCTTCCTCATCTACCCAAAAGACCC
TCAAAGAATGCAAGAATTGTCAGACCCACTACTTGTTTTGAAGTTGTCTCTTGTTTTCAG
GGTCCAAGACTCACCAAAAAGATTGTGCCAGAAAAAATAGGGAGAGATTGTTTTGCTAGC
ACAACTTCAGGTGGCCAGCAGACCTCTTCAGTTGGTGTAAATCCACAATTTTCAGCTCCA
TCACCATCGTCTCAAGTAGGGTCTCCTCTTTTTTGGATTGGAGTTGGTGTTGGGCTCTCA
GCACTTTTCTCATGGGTGGCTTCATACCTAAAGAAGTACGCAATGCAGCAAGCATTCAAA
ACAATGATGGGGCAAATGAATAGTAACCAGAATAGTCCATTTAGTAACACTGCTTTTTCA
CCTGGGTCACCTTTTCCGTTCCCACCACCACCTCCAATGTCAGGTGCAGCTAGTTCATCA
CCTACACCACCTGCATCATCAGCTTCATTTGCATCTCAGCCGGTTACTGTTGATGTGTCC
GCAACCAAAGTGGAGGAACCTCCAGCTGTAAATGTCAAGAAGAATGATACAGAAGCTGAA
AGGGTACCAAAGAAAAATGCTTTTATTGACATATCTCCCGATGAAACATTCCAAAAGGGT
GCTTTCGAAAATTATAAAGAATCAAATGAGACAGCTTCAGTAACTGTTGATCAGGTAACT
CAAAATGGGGCTGCTTCAAAGTCGGGATTTGGTGCAAATACATCTGACAGTACCGGTTTT
GGTGCAAATACATCTGATAGTACCTCATCAACTGAAAAATCAAACCCGCTAATGTCAGTG
GATGCTCTGGAGAAAATGATGGAAGATCCAACAGTGCAGAAGATGGTTTACCCCTATCTA
CCGGAGGAGATGAGGAATCCTACAACATTTAAATGGATGCTACAAAATCCACAATACCGT
CAACAGTTGCAGGACATGCTGAATAACATGGGTGGAAACCCAGAATGGGACAACCGCATG
GTGGATTCCTTGAAGAATTTTGATCTTAGCAGCCCTGAAATTAAGCAACAATTTGATCAA
ATAGGGCTTACTCCCGAGGAAGTCATTTCGAAAATTATGGCTAATCCTGATGTTGCTATG
GCTTTCCAAAATCCAAGAGTTCAAGCAGCCATCATGGATTGTTCTCAGAATCCACTGAGT
ATCGCAAAGTATCAAAACGACAAGGAGGTGATGGATGTCTTCAATAAAATATCTGAACTA
TTCCCTGGGGTGTCGGGTTCACCTTGA

Peptide Sequence

PEP ID

XP_016469330.1
PEP Infomation

PREDICTED: protein TIC 40, chloroplastic [Nicotiana tabacum]
Sequence

MENIGIVSSPKMVLGLSSNPRNSVITSKPFFGLPHLPKRPSKNARIVRPTTCFEVVSCFQ
GPRLTKKIVPEKIGRDCFASTTSGGQQTSSVGVNPQFSAPSPSSQVGSPLFWIGVGVGLS
ALFSWVASYLKKYAMQQAFKTMMGQMNSNQNSPFSNTAFSPGSPFPFPPPPPMSGAASSS
PTPPASSASFASQPVTVDVSATKVEEPPAVNVKKNDTEAERVPKKNAFIDISPDETFQKG
AFENYKESNETASVTVDQVTQNGAASKSGFGANTSDSTGFGANTSDSTSSTEKSNPLMSV
DALEKMMEDPTVQKMVYPYLPEEMRNPTTFKWMLQNPQYRQQLQDMLNNMGGNPEWDNRM
VDSLKNFDLSSPEIKQQFDQIGLTPEEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPLS
IAKYQNDKEVMDVFNKISELFPGVSGSP

Transcript Sequence

Gene sequence data has not been registered.